Ralph, I'd try going with much smaller main jets. Maybe 140's (check Pat's jetting calculator). I don't have the freak kit, but found that with a uni filter, drilled airbox, and TBs needles (1 shim) my bike ran best with 125 mains. Other people on the board run 130's to 135's with this setup, but the difference is they are running Bubs, or gutted stock pipes, not the TORs which do not seem to flow as well. TOR's are quieter though.
Since you have the freak, and short TORs, a slightly unusual combo, I'd look at what others who run more open pipes are using and then go a step or two smaller.
