Okay, I went down and talked with Keith and Steve, they said they followed instructions from Brent's Freak kit and that the jets were with the kit. They were more than willing to have me drop it off again and have them play with the jetting.
They did emphasize that the Freak puts more air into the engine, so you have to have more gas (and I was running a little lean anyway). They also explained that those jets do not influence how the bike runs unless the throttle is wide open.
I know NOTHING about working on engines. I have never done this kind of thing; I leave all my vehicles stock until I trade them in. I need help with this. I wanted the Freak because I wanted the bike to run better and have a little more power.
This seems like a lot of money to limit the top end and make the bike run worse.